This page summarize my summer intern work, includes final report, weekly report, codes, presentation.

To sum up, I mainly do two projects in this summer, which can be divided again into four works:

• Lichtman Lab:

  • NMJ tracing and segmenting with statistical work
  • NMJ automatic segmentation pipeline

• Hanspiter Lab:

  • Synapse prediction
  • Synaptic polarity prediction

For NMJ tracing, segmenting and automatic prediction work, we push forward the project with the generous daily help of our mentor Jeff.

For Synapse project, I work with Zudi and Donglai, we now rank No.1 in the CREMI contest. And we will submit a paper to CVPR this November.

final report

• online pdf

• pdf in github

You may also find the PDF Version of this report from github.

presentation

in Lichtman lab

• online pdf

in Tsinghua

• online pdf

codes

Main codes Automatic pipeline Synapse polarity

detailed progress

I summarized my daily progress about the following project during my summer intern, please visit the related web pages:

NMJ project Synapse Prediction Synaptic Partner and Cluster Project